Transcript: MGP_BALBcJ_T0042509.1

Description

Rac GTPase-activating protein 1 [Source:MGI Symbol;Acc:MGI:1349423]

Gene Synonyms

AI227039, AI327394, Band25, GTPase, MgcRacGAP, Mgcracgap, gtl11, mKIAA1478

Location

Chromosome 15: 97,618,772-97,650,324 reverse strand.

Reference strain equivalent

Racgap1

About this transcript

This transcript has 18 exons, is annotated with 22 domains and features and maps to 314 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0022301.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0042509.1	-	3001	611aa	MGP_BALBcJ_P0042509	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27825	E9Q071 E9Q1Y6 E9Q851 E9Q9N9 F6WD40 Q9WVM1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0042510.1	-	2882	611aa	MGP_BALBcJ_P0042510	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0042516.1	-	834	229aa	MGP_BALBcJ_P0042516	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0042521.1	-	605	131aa	MGP_BALBcJ_P0042521	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0042522.1	-	374	35aa	MGP_BALBcJ_P0042522	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0042515.1	-	945	151aa	MGP_BALBcJ_P0042515	Nonsense mediated decay		-	-
MGP_BALBcJ_T0042519.1	-	702	72aa	MGP_BALBcJ_P0042519	Nonsense mediated decay		-	-
MGP_BALBcJ_T0042518.1	-	550	72aa	MGP_BALBcJ_P0042518	Nonsense mediated decay		-	-
MGP_BALBcJ_T0042512.1	-	365	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0042513.1	-	4330	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0042514.1	-	1180	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0042511.1	-	892	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0042520.1	-	688	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0042517.1	-	653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 18, Coding exons: 16, Transcript length: 3,001 bps, Translation length: 611 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9WVM1

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS27825

Version

MGP_BALBcJ_T0042509.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0042509.1

Summary

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Transcript: MGP_BALBcJ_T0042509.1

Summary

About Us

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