Transcript: MGP_BALBcJ_T0040225.1

Description

TBC1 domain family, member 4 [Source:MGI Symbol;Acc:MGI:2429660]

Gene Synonyms

5930406J04Rik, A930035N22, AS160, AV295684, As160

Location

Chromosome 14: 95,002,715-95,166,924 reverse strand.

Reference strain equivalent

Tbc1d4

About this transcript

This transcript has 20 exons, is annotated with 2 domains and features and maps to 295 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0021585.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0040229.1	-	4762	1306aa	MGP_BALBcJ_P0040229	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0040226.1	-	6483	1243aa	MGP_BALBcJ_P0040226	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0040228.1	-	5043	956aa	MGP_BALBcJ_P0040228	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0040234.1	-	3249	839aa	MGP_BALBcJ_P0040234	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0040233.1	-	1049	98aa	MGP_BALBcJ_P0040233	Nonsense mediated decay		-	-
MGP_BALBcJ_T0040227.1	-	3823	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0040230.1	-	3103	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0040232.1	-	2740	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0040231.1	-	2713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0040235.1	-	674	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0040225.1	-	5777	1198aa	MGP_BALBcJ_P0040225	Unknown likely coding	CCDS49556	E0CX53 E9Q6Q8 F6S7E8 F6SUV7 H7BX82	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 5,777 bps, Translation length: 1,198 residues

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS49556

Version

MGP_BALBcJ_T0040225.1

Type

Unknown likely coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0040225.1

Summary

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Transcript: MGP_BALBcJ_T0040225.1

Summary

About Us

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