Transcript: MGP_BALBcJ_T0035449.1

Description

CLOCK interacting protein, circadian [Source:MGI Symbol;Acc:MGI:1919185]

Gene Synonyms

2310044G17Rik, AI842544, AI853744, Kiaa1737, mKIAA1737

Location

Chromosome 12: 84,825,292-84,841,673 forward strand.

Reference strain equivalent

Cipc

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features and maps to 316 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0019911.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0035452.1	-	4098	432aa	MGP_BALBcJ_P0035452	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0035458.1	-	1499	429aa	MGP_BALBcJ_P0035458	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0035450.1	-	1454	411aa	MGP_BALBcJ_P0035450	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0035456.1	-	393	130aa	MGP_BALBcJ_P0035456	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0035449.1	-	2695	82aa	MGP_BALBcJ_P0035449	Nonsense mediated decay	CCDS56849	A0A087WNZ2 A0A087WPE5 A0A087WQ97 A0A087WRF0 A0A087WRZ3 Q8R0W1 Z4YJJ0	-
MGP_BALBcJ_T0035451.1	-	872	60aa	MGP_BALBcJ_P0035451	Nonsense mediated decay		-	-
MGP_BALBcJ_T0035457.1	-	573	82aa	MGP_BALBcJ_P0035457	Nonsense mediated decay		-	-
MGP_BALBcJ_T0035454.1	-	564	81aa	MGP_BALBcJ_P0035454	Nonsense mediated decay		-	-
MGP_BALBcJ_T0035455.1	-	426	78aa	MGP_BALBcJ_P0035455	Nonsense mediated decay		-	-
MGP_BALBcJ_T0035453.1	-	526	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 2,695 bps, Translation length: 82 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8R0W1

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS56849

Version

MGP_BALBcJ_T0035449.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0035449.1

Summary

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Transcript: MGP_BALBcJ_T0035449.1

Summary

About Us

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