Transcript: MGP_BALBcJ_T0034808.1

Description

SEC23 homolog A, COPII coat complex component [Source:MGI Symbol;Acc:MGI:1349635]

Gene Synonyms

Msec23, Sec23, Sec23r

Location

Chromosome 12: 56,420,436-56,474,491 reverse strand.

Reference strain equivalent

Sec23a

About this transcript

This transcript has 20 exons, is annotated with 20 domains and features and maps to 405 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0019704.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0034808.1	-	4109	765aa	MGP_BALBcJ_P0034808	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS25931	E9Q1S3 Q01405	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0034809.1	-	2529	736aa	MGP_BALBcJ_P0034809	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0034812.1	-	754	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0034810.1	-	619	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0034811.1	-	370	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 4,109 bps, Translation length: 765 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q01405

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS25931

Version

MGP_BALBcJ_T0034808.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0034808.1

Summary

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Transcript: MGP_BALBcJ_T0034808.1

Summary

About Us

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