Transcript: MGP_BALBcJ_T0032992.1

Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:MGI Symbol;Acc:MGI:1933621]

Gene Synonyms

AW322457, Baf60b

Location

Chromosome 11: 105,298,373-105,302,993 reverse strand.

Reference strain equivalent

Smarcd2

About this transcript

This transcript has 12 exons, is annotated with 12 domains and features and maps to 242 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0019243.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0032993.1	-	2747	531aa	MGP_BALBcJ_P0032993	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0032992.1	-	2548	484aa	MGP_BALBcJ_P0032992	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48957, CCDS48958	G3UXC0 Q99JR8	-
MGP_BALBcJ_T0032996.1	-	884	247aa	MGP_BALBcJ_P0032996	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0032999.1	-	608	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0032998.1	-	405	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0032994.1	-	1250	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0032995.1	-	886	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0032997.1	-	621	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0033000.1	-	485	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,548 bps, Translation length: 484 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99JR8

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS48957, CCDS48958

Version

MGP_BALBcJ_T0032992.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0032992.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_BALBcJ_T0032992.1

Summary

About Us

Get help

Our sister sites

Follow us