Transcript: MGP_BALBcJ_T0032758.1

Description

elongation factor Tu GTP binding domain containing 2 [Source:MGI Symbol;Acc:MGI:1336880]

Gene Synonyms

116kDa, Snrp116, U5-116kD

Location

Chromosome 11: 101,859,217-101,901,234 reverse strand.

Reference strain equivalent

Eftud2

About this transcript

This transcript has 28 exons, is annotated with 41 domains and features and maps to 412 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0019188.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0032759.1	-	3342	972aa	MGP_BALBcJ_P0032759	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0032758.1	-	3324	972aa	MGP_BALBcJ_P0032758	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48947, CCDS48948	A2AH85 G3UXK8 G3UZ25 G3UZ34 G3V021 O08810 Q543F1	-
MGP_BALBcJ_T0032761.1	-	2889	962aa	MGP_BALBcJ_P0032761	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0032760.1	-	397	97aa	MGP_BALBcJ_P0032760	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0032766.1	-	679	30aa	MGP_BALBcJ_P0032766	Nonsense mediated decay		-	-
MGP_BALBcJ_T0032762.1	-	567	84aa	MGP_BALBcJ_P0032762	Nonsense mediated decay		-	-
MGP_BALBcJ_T0032768.1	-	3228	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0032767.1	-	1320	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0032764.1	-	934	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0032770.1	-	796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0032763.1	-	631	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0032765.1	-	629	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0032769.1	-	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 28, Coding exons: 27, Transcript length: 3,324 bps, Translation length: 972 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O08810

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS48947, CCDS48948

Version

MGP_BALBcJ_T0032758.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0032758.1

Summary

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Transcript: MGP_BALBcJ_T0032758.1

Summary

About Us

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