Transcript: MGP_BALBcJ_T0030866.1

Description

seizure related gene 6 [Source:MGI Symbol;Acc:MGI:104745]

Gene Synonyms

BSRP-C, D11Bhm177e, Kiaa4158, sez-6

Location

Chromosome 11: 76,279,705-76,328,085 forward strand.

Reference strain equivalent

Sez6

About this transcript

This transcript has 17 exons, is annotated with 56 domains and features and maps to 337 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0018698.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0030866.1	-	4239	991aa	MGP_BALBcJ_P0030866	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS25087, CCDS70255	F6SXT0 F6XNR8 Q7TSK2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0030869.1	-	3964	977aa	MGP_BALBcJ_P0030869	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0030873.1	-	832	277aa	MGP_BALBcJ_P0030873	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0030872.1	-	3424	451aa	MGP_BALBcJ_P0030872	Nonsense mediated decay		-	-
MGP_BALBcJ_T0030871.1	-	813	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0030867.1	-	4523	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0030870.1	-	3226	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0030868.1	-	2116	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0030874.1	-	467	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 4,239 bps, Translation length: 991 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7TSK2

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS25087, CCDS70255

Version

MGP_BALBcJ_T0030866.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0030866.1

Summary

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Transcript: MGP_BALBcJ_T0030866.1

Summary

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