Transcript: MGP_BALBcJ_T0028407.1

Description

nitrogen permease regulator-like 3 [Source:MGI Symbol;Acc:MGI:109258]

Gene Synonyms

-14 gene, Aag, CGTHBA, HS-26, HS-40, Mare, Phg, Prox1, m(alpha)RE

Location

Chromosome 11: 29,467,774-29,511,678 reverse strand.

Reference strain equivalent

Nprl3

About this transcript

This transcript has 11 exons, is annotated with 7 domains and features and maps to 126 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0018071.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0028414.1	-	2865	569aa	MGP_BALBcJ_P0028414	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0028418.1	-	1642	544aa	MGP_BALBcJ_P0028418	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0028425.1	-	623	182aa	MGP_BALBcJ_P0028425	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0028413.1	-	3417	77aa	MGP_BALBcJ_P0028413	Nonsense mediated decay		-	-
MGP_BALBcJ_T0028415.1	-	2945	58aa	MGP_BALBcJ_P0028415	Nonsense mediated decay		-	-
MGP_BALBcJ_T0028407.1	-	2696	69aa	MGP_BALBcJ_P0028407	Nonsense mediated decay	CCDS24521	A2AAX8 A7M7S2 D6RGB2 F2Z3V7 F2Z3Y4 F2Z404 Q8VIJ8	-
MGP_BALBcJ_T0028417.1	-	1602	69aa	MGP_BALBcJ_P0028417	Nonsense mediated decay		-	-
MGP_BALBcJ_T0028422.1	-	537	80aa	MGP_BALBcJ_P0028422	Nonsense mediated decay		-	-
MGP_BALBcJ_T0028412.1	-	3531	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0028424.1	-	602	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0028423.1	-	411	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0028426.1	-	406	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0028420.1	-	761	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0028421.1	-	713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0028419.1	-	705	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0028416.1	-	680	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 11, Coding exons: 3, Transcript length: 2,696 bps, Translation length: 69 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8VIJ8

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS24521

Version

MGP_BALBcJ_T0028407.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0028407.1

Summary

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Transcript: MGP_BALBcJ_T0028407.1

Summary

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