Transcript: MGP_BALBcJ_T0028270.1

Description

coiled-coil domain containing 85A [Source:MGI Symbol;Acc:MGI:2445069]

Gene Synonyms

E030025D05Rik, Kiaa1912

Location

Chromosome 11: 25,551,117-25,752,091 reverse strand.

Reference strain equivalent

Ccdc85a

About this transcript

This transcript has 5 exons, is annotated with 20 domains and features and maps to 255 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0018041.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0028273.1	-	3809	545aa	MGP_BALBcJ_P0028273	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0028270.1	-	5442	500aa	MGP_BALBcJ_P0028270	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS24489, CCDS48760	E0CX32 F6TRJ8 F7B6W4 Q5SP85	-
MGP_BALBcJ_T0028272.1	-	5343	460aa	MGP_BALBcJ_P0028272	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0028271.1	-	5315	460aa	MGP_BALBcJ_P0028271	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0028274.1	-	448	143aa	MGP_BALBcJ_P0028274	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0028275.1	-	3132	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 5,442 bps, Translation length: 500 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5SP85

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS24489, CCDS48760

Version

MGP_BALBcJ_T0028270.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0028270.1

Summary

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Transcript: MGP_BALBcJ_T0028270.1

Summary

About Us

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