Transcript: MGP_BALBcJ_T0026149.1

Description

cold inducible RNA binding protein [Source:MGI Symbol;Acc:MGI:893588]

Gene Synonyms

Cirp, R74941

Location

Chromosome 10: 78,151,241-78,156,136 forward strand.

Reference strain equivalent

Cirbp

About this transcript

This transcript has 4 exons, is annotated with 13 domains and features and maps to 141 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0017426.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0026150.1	-	1321	172aa	MGP_BALBcJ_P0026150	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0026151.1	-	836	168aa	MGP_BALBcJ_P0026151	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0026149.1	-	423	108aa	MGP_BALBcJ_P0026149	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35975	D3YU80 K4DI65 P60824	-
MGP_BALBcJ_T0026153.1	-	912	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0026154.1	-	894	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0026155.1	-	593	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0026152.1	-	376	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 423 bps, Translation length: 108 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P60824

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS35975

Version

MGP_BALBcJ_T0026149.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0026149.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_BALBcJ_T0026149.1

Summary

About Us

Get help

Our sister sites

Follow us