Transcript: MGP_BALBcJ_T0023539.1

Description

immunoglobulin superfamily, member 9 [Source:MGI Symbol;Acc:MGI:2135283]

Gene Synonyms

644ETD8, Dasm1, Igsf9a, Kiaa1355-hp, NRT1, Ncaml, Nrt1, mKIAA1355

Location

Chromosome 1: 171,598,165-171,605,938 forward strand.

Reference strain equivalent

Igsf9

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features and maps to 69 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0016729.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0023546.1	-	4192	1179aa	MGP_BALBcJ_P0023546	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0023542.1	-	4120	1179aa	MGP_BALBcJ_P0023542	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0023540.1	-	775	168aa	MGP_BALBcJ_P0023540	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0023548.1	-	636	211aa	MGP_BALBcJ_P0023548	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0023539.1	-	617	109aa	MGP_BALBcJ_P0023539	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15515	A0A0A6YXP1 D3YZD2 D3Z7T6 Q05BQ1	-
MGP_BALBcJ_T0023545.1	-	3951	528aa	MGP_BALBcJ_P0023545	Nonsense mediated decay		-	-
MGP_BALBcJ_T0023541.1	-	645	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0023544.1	-	2028	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0023551.1	-	926	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0023549.1	-	921	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0023550.1	-	796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0023547.1	-	786	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0023543.1	-	608	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0023552.1	-	590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 617 bps, Translation length: 109 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q05BQ1

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS15515

Version

MGP_BALBcJ_T0023539.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0023539.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_BALBcJ_T0023539.1

Summary

About Us

Get help

Our sister sites

Follow us