Transcript: MGP_BALBcJ_T0019667.1

Description

signal transducer and activator of transcription 1 [Source:MGI Symbol;Acc:MGI:103063]

Gene Synonyms

2010005J02Rik, AA408197

Location

Chromosome 1: 49,715,568-49,751,291 forward strand.

Reference strain equivalent

Stat1

About this transcript

This transcript has 23 exons, is annotated with 27 domains and features and maps to 221 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0015945.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0019675.1	-	3998	755aa	MGP_BALBcJ_P0019675	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0019668.1	-	5151	749aa	MGP_BALBcJ_P0019668	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0019670.1	-	4241	749aa	MGP_BALBcJ_P0019670	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0019677.1	-	3298	243aa	MGP_BALBcJ_P0019677	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0019667.1	-	2834	712aa	MGP_BALBcJ_P0019667	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56628, CCDS78581	A0A087WRI1 A0A087WSP5 A0A087WSQ5 Q8C3V4 Q8CFQ1 Q99K94	-
MGP_BALBcJ_T0019669.1	-	2803	712aa	MGP_BALBcJ_P0019669	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0019672.1	-	2588	712aa	MGP_BALBcJ_P0019672	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0019671.1	-	715	154aa	MGP_BALBcJ_P0019671	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0019678.1	-	886	130aa	MGP_BALBcJ_P0019678	Nonsense mediated decay		-	-
MGP_BALBcJ_T0019674.1	-	1344	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0019676.1	-	827	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0019673.1	-	548	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 23, Coding exons: 21, Transcript length: 2,834 bps, Translation length: 712 residues

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS56628, CCDS78581

Version

MGP_BALBcJ_T0019667.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0019667.1

Summary

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Transcript: MGP_BALBcJ_T0019667.1

Summary

About Us

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