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Transcript: MGP_AKRJ_T0034334.1

Description

pumilio RNA-binding family member 2 [Source:MGI Symbol;Acc:MGI:1931751]

Gene Synonyms

5730503J23Rik, Kiaa0235, Pumm2

Location

Chromosome 12: 5,961,709-6,039,805 forward strand.

Reference strain equivalent

Pum2

About this transcript

This transcript has 20 exons, is annotated with 50 domains and features and maps to 390 oligo probes.

Gene

This transcript is a product of gene MGP_AKRJ_G0019524.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_AKRJ_T0034342.1-62261066aaMGP_AKRJ_P0034342
 
Protein coding
-Ensembl Canonical
MGP_AKRJ_T0034337.1-63111064aaMGP_AKRJ_P0034337
 
Protein coding
--
MGP_AKRJ_T0034334.1-5874985aaMGP_AKRJ_P0034334
 
Protein coding
CCDS25802, CCDS49025, CCDS49026, CCDS79105E9PW51 E9Q0P1 E9Q4Q6
E9Q765 F6YD01 F7A034
Q3TQ29 Q3UR91 Q80U58
-
MGP_AKRJ_T0034335.1-49841064aaMGP_AKRJ_P0034335
 
Protein coding
--
MGP_AKRJ_T0034336.1-3587980aaMGP_AKRJ_P0034336
 
Protein coding
--
MGP_AKRJ_T0034340.1-35601066aaMGP_AKRJ_P0034340
 
Protein coding
--
MGP_AKRJ_T0034341.1-3295985aaMGP_AKRJ_P0034341
 
Protein coding
--
MGP_AKRJ_T0034343.1-902262aaMGP_AKRJ_P0034343
 
Protein coding
--
MGP_AKRJ_T0034348.1-706234aaMGP_AKRJ_P0034348
 
Protein coding
--
MGP_AKRJ_T0034349.1-665221aaMGP_AKRJ_P0034349
 
Protein coding
--
MGP_AKRJ_T0034344.1-648185aaMGP_AKRJ_P0034344
 
Protein coding
--
MGP_AKRJ_T0034345.1-472109aaMGP_AKRJ_P0034345
 
Protein coding
--
MGP_AKRJ_T0034339.1-621835aaMGP_AKRJ_P0034339
 
Nonsense mediated decay
--
MGP_AKRJ_T0034347.1-99435aaMGP_AKRJ_P0034347
 
Nonsense mediated decay
--
MGP_AKRJ_T0034338.1-518No protein-
 
Processed transcript
--
MGP_AKRJ_T0034350.1-612No protein-
 
Retained intron
--
MGP_AKRJ_T0034346.1-63801008aaMGP_AKRJ_P0034346
 
Unknown likely coding
--

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 5,874 bps, Translation length: 985 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q80U58

CCDS

This transcript is a member of the Mouse AKR/J CCDS set: CCDS25802, CCDS49025, CCDS49026, CCDS79105

Version

MGP_AKRJ_T0034334.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.