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Transcript: MGP_AKRJ_T0032139.1

Description

retinoic acid receptor, alpha [Source:MGI Symbol;Acc:MGI:97856]

Gene Synonyms

Nr1b1, RAR, RAR alpha 1, RARalpha1

Location

Chromosome 11: 100,303,343-100,351,309 forward strand.

Reference strain equivalent

Rara

About this transcript

This transcript has 9 exons, is annotated with 42 domains and features and maps to 233 oligo probes.

Gene

This transcript is a product of gene MGP_AKRJ_G0019016.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_AKRJ_T0032141.1-3366462aaMGP_AKRJ_P0032141
 
Protein coding
-Ensembl Canonical
MGP_AKRJ_T0032145.1-3235459aaMGP_AKRJ_P0032145
 
Protein coding
--
MGP_AKRJ_T0032143.1-3111462aaMGP_AKRJ_P0032143
 
Protein coding
--
MGP_AKRJ_T0032140.1-2469462aaMGP_AKRJ_P0032140
 
Protein coding
--
MGP_AKRJ_T0032139.1-2380462aaMGP_AKRJ_P0032139
 
Protein coding
CCDS36304, CCDS48905P11416 Q3U3R3 -
MGP_AKRJ_T0032142.1-356No protein-
 
Processed transcript
--
MGP_AKRJ_T0032144.1-307No protein-
 
Processed transcript
--

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,380 bps, Translation length: 462 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P11416

CCDS

This transcript is a member of the Mouse AKR/J CCDS set: CCDS36304, CCDS48905

Version

MGP_AKRJ_T0032139.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.