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Transcript: MGP_AJ_T0055060.1

Description

sodium channel, voltage-gated, type II, alpha 1 [Source:MGI Symbol;Acc:MGI:98248]

Gene Synonyms

6430408L10, A230052E19Rik, Nav1.2, Scn2a

Location

Chromosome 2: 62,916,491-62,984,272 forward strand.

Reference strain equivalent

Scn2a

About this transcript

This transcript has 11 exons, is annotated with 17 domains and features and maps to 350 oligo probes.

Gene

This transcript is a product of gene MGP_AJ_G0025756.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_AJ_T0055061.1-84461853aaMGP_AJ_P0055061
 
Protein coding
-Ensembl Canonical
MGP_AJ_T0055065.1-82011853aaMGP_AJ_P0055065
 
Protein coding
--
MGP_AJ_T0055064.1-58881853aaMGP_AJ_P0055064
 
Protein coding
--
MGP_AJ_T0055060.1-1810504aaMGP_AJ_P0055060
 
Protein coding
CCDS38130A0A0J9YTW6 A0A0J9YTX0 A9JQD3
B1AWN6 F7AMU5 		-
MGP_AJ_T0055067.1-576106aaMGP_AJ_P0055067
 
Nonsense mediated decay
--
MGP_AJ_T0055068.1-51398aaMGP_AJ_P0055068
 
Nonsense mediated decay
--
MGP_AJ_T0055062.1-2431No protein-
 
Retained intron
--
MGP_AJ_T0055063.1-1479No protein-
 
Retained intron
--
MGP_AJ_T0055066.1-698No protein-
 
Retained intron
--

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,810 bps, Translation length: 504 residues

CCDS

This transcript is a member of the Mouse A/J CCDS set: CCDS38130

Version

MGP_AJ_T0055060.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.