Transcript: MGP_129S1SvImJ_T0073992.1

Description

MAP kinase-activated protein kinase 5 [Source:MGI Symbol;Acc:MGI:1333110]

Gene Synonyms

MK5, PRAK

Location

Chromosome 5: 125,017,856-125,041,949 reverse strand.

Reference strain equivalent

Mapkapk5

About this transcript

This transcript has 14 exons, is annotated with 13 domains and features and maps to 269 oligo probes.

Gene

This transcript is a product of gene MGP_129S1SvImJ_G0030032.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_129S1SvImJ_T0073992.1	-	2234	473aa	MGP_129S1SvImJ_P0073992	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS39248	A0A0G2JDF3 A0A0G2JGA5 F7DD22 O54992	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_129S1SvImJ_T0073993.1	-	1513	471aa	MGP_129S1SvImJ_P0073993	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0073998.1	-	975	324aa	MGP_129S1SvImJ_P0073998	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0073999.1	-	969	322aa	MGP_129S1SvImJ_P0073999	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0074003.1	-	592	187aa	MGP_129S1SvImJ_P0074003	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0073996.1	-	436	113aa	MGP_129S1SvImJ_P0073996	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0074002.1	-	540	62aa	MGP_129S1SvImJ_P0074002	Nonsense mediated decay		-	-
MGP_129S1SvImJ_T0073997.1	-	1296	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_129S1SvImJ_T0074000.1	-	1110	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_129S1SvImJ_T0074004.1	-	366	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_129S1SvImJ_T0074001.1	-	844	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_129S1SvImJ_T0073994.1	-	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_129S1SvImJ_T0073995.1	-	358	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,234 bps, Translation length: 473 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O54992

CCDS

This transcript is a member of the Mouse 129S1/SvImJ CCDS set: CCDS39248

Version

MGP_129S1SvImJ_T0073992.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_129S1SvImJ_T0073992.1

Summary

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Transcript: MGP_129S1SvImJ_T0073992.1

Summary

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