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Mouse 129S1/SvImJ (129S1_SvImJ_v1) ▼

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Transcript: MGP_129S1SvImJ_T0065892.1

Description

polypyrimidine tract binding protein 3 [Source:MGI Symbol;Acc:MGI:1923334]

Gene Synonyms

5830471K22Rik, AA407443, AI462022, AW107884, C86549, Rod1

Location

Chromosome 4: 58,375,337-58,454,528 reverse strand.

Reference strain equivalent

Ptbp3

About this transcript

This transcript has 15 exons, is annotated with 35 domains and features and maps to 358 oligo probes.

Gene

This transcript is a product of gene MGP_129S1SvImJ_G0028336.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_129S1SvImJ_T0065892.1-6677554aaMGP_129S1SvImJ_P0065892
 
Protein coding
CCDS18220, CCDS18221F7C521 G3UXA6 G3UXZ6
G3UXZ8 G3UY95 G3UZ01
G3UZG7 G8JL74 Q8BHD7
Ensembl Canonical
MGP_129S1SvImJ_T0065893.1-3409551aaMGP_129S1SvImJ_P0065893
 
Protein coding
--
MGP_129S1SvImJ_T0065900.1-606104aaMGP_129S1SvImJ_P0065900
 
Protein coding
--
MGP_129S1SvImJ_T0065895.1-566188aaMGP_129S1SvImJ_P0065895
 
Protein coding
--
MGP_129S1SvImJ_T0065898.1-550146aaMGP_129S1SvImJ_P0065898
 
Protein coding
--
MGP_129S1SvImJ_T0065896.1-128645aaMGP_129S1SvImJ_P0065896
 
Nonsense mediated decay
--
MGP_129S1SvImJ_T0065897.1-55841aaMGP_129S1SvImJ_P0065897
 
Nonsense mediated decay
--
MGP_129S1SvImJ_T0065894.1-669No protein-
 
Retained intron
--
MGP_129S1SvImJ_T0065899.1-447No protein-
 
Retained intron
--

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 6,677 bps, Translation length: 554 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BHD7

CCDS

This transcript is a member of the Mouse 129S1/SvImJ CCDS set: CCDS18220, CCDS18221

Version

MGP_129S1SvImJ_T0065892.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.