Ensembl mirror
More ▼
Search »
Mouse 129S1/SvImJ (129S1_SvImJ_v1) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: MGP_129S1SvImJ_T0065061.1

Description

aprataxin [Source:MGI Symbol;Acc:MGI:1913658]

Gene Synonyms

2410016G21Rik, AA388047, FHA-HIT

Location

Chromosome 4: 38,559,045-38,582,271 reverse strand.

Reference strain equivalent

Aptx

About this transcript

This transcript has 11 exons, is annotated with 19 domains and features and maps to 326 oligo probes.

Gene

This transcript is a product of gene MGP_129S1SvImJ_G0028145.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_129S1SvImJ_T0065061.1-5219342aaMGP_129S1SvImJ_P0065061
 
Protein coding
CCDS38711, CCDS38712E0CXB7 Q7TQC5 Ensembl Canonical
MGP_129S1SvImJ_T0065062.1-5086335aaMGP_129S1SvImJ_P0065062
 
Protein coding
--
MGP_129S1SvImJ_T0065063.1-2385240aaMGP_129S1SvImJ_P0065063
 
Protein coding
--
MGP_129S1SvImJ_T0065064.1-137848aaMGP_129S1SvImJ_P0065064
 
Nonsense mediated decay
--
MGP_129S1SvImJ_T0065066.1-63948aaMGP_129S1SvImJ_P0065066
 
Nonsense mediated decay
--
MGP_129S1SvImJ_T0065065.1-355No protein-
 
Processed transcript
--

Summary

Statistics

Exons: 11, Coding exons: 8, Transcript length: 5,219 bps, Translation length: 342 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7TQC5

CCDS

This transcript is a member of the Mouse 129S1/SvImJ CCDS set: CCDS38711, CCDS38712

Version

MGP_129S1SvImJ_T0065061.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.