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Mouse 129S1/SvImJ (129S1_SvImJ_v1) ▼

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Transcript: MGP_129S1SvImJ_T0055041.1

Description

sodium channel, voltage-gated, type II, alpha 1 [Source:MGI Symbol;Acc:MGI:98248]

Gene Synonyms

6430408L10, A230052E19Rik, Nav1.2, Scn2a

Location

Chromosome 2: 65,436,785-65,503,068 forward strand.

Reference strain equivalent

Scn2a

About this transcript

This transcript has 11 exons, is annotated with 17 domains and features and maps to 375 oligo probes.

Gene

This transcript is a product of gene MGP_129S1SvImJ_G0025780.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_129S1SvImJ_T0055042.1-82541791aaMGP_129S1SvImJ_P0055042
 
Protein coding
-Ensembl Canonical
MGP_129S1SvImJ_T0055046.1-80091791aaMGP_129S1SvImJ_P0055046
 
Protein coding
--
MGP_129S1SvImJ_T0055045.1-57031791aaMGP_129S1SvImJ_P0055045
 
Protein coding
--
MGP_129S1SvImJ_T0055041.1-1810504aaMGP_129S1SvImJ_P0055041
 
Protein coding
CCDS38130A0A0J9YTW6 A0A0J9YTX0 A9JQD3
B1AWN6 F7AMU5 		-
MGP_129S1SvImJ_T0055048.1-576106aaMGP_129S1SvImJ_P0055048
 
Nonsense mediated decay
--
MGP_129S1SvImJ_T0055049.1-51398aaMGP_129S1SvImJ_P0055049
 
Nonsense mediated decay
--
MGP_129S1SvImJ_T0055043.1-2454No protein-
 
Retained intron
--
MGP_129S1SvImJ_T0055044.1-1482No protein-
 
Retained intron
--
MGP_129S1SvImJ_T0055047.1-698No protein-
 
Retained intron
--

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,810 bps, Translation length: 504 residues

CCDS

This transcript is a member of the Mouse 129S1/SvImJ CCDS set: CCDS38130

Version

MGP_129S1SvImJ_T0055041.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.