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Mouse 129S1/SvImJ (129S1_SvImJ_v1) ▼

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Transcript: MGP_129S1SvImJ_T0051447.1

Description

RIKEN cDNA 4430402I18 gene [Source:MGI Symbol;Acc:MGI:1918036]

Gene Synonyms

AW122618, Spata6l

Location

Chromosome 19: 27,319,915-27,340,950 reverse strand.

Reference strain equivalent

Spata6l

About this transcript

This transcript has 9 exons, is annotated with 9 domains and features and maps to 33 oligo probes.

Gene

This transcript is a product of gene MGP_129S1SvImJ_G0025013.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_129S1SvImJ_T0051451.1-1559401aaMGP_129S1SvImJ_P0051451
 
Protein coding
-Ensembl Canonical
MGP_129S1SvImJ_T0051447.1-263776aaMGP_129S1SvImJ_P0051447
 
Protein coding
CCDS37948A0A0B4J1N4 B2RV46 B7ZWC9
B7ZWD0 E0CYX4 F6UU42
H3BLJ4 		-
MGP_129S1SvImJ_T0051454.1-1066333aaMGP_129S1SvImJ_P0051454
 
Protein coding
--
MGP_129S1SvImJ_T0051453.1-1057330aaMGP_129S1SvImJ_P0051453
 
Protein coding
--
MGP_129S1SvImJ_T0051455.1-38439aaMGP_129S1SvImJ_P0051455
 
Protein coding
--
MGP_129S1SvImJ_T0051449.1-181293aaMGP_129S1SvImJ_P0051449
 
Nonsense mediated decay
--
MGP_129S1SvImJ_T0051452.1-460No protein-
 
Processed transcript
--
MGP_129S1SvImJ_T0051450.1-1444347aaMGP_129S1SvImJ_P0051450
 
Unknown likely coding
--

Summary

Statistics

Exons: 9, Coding exons: 3, Transcript length: 2,637 bps, Translation length: 76 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: B2RV46

CCDS

This transcript is a member of the Mouse 129S1/SvImJ CCDS set: CCDS37948

Version

MGP_129S1SvImJ_T0051447.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.