Transcript: MGP_129S1SvImJ_T0040424.1

Description

transmembrane and tetratricopeptide repeat containing 4 [Source:MGI Symbol;Acc:MGI:1921050]

Gene Synonyms

4930403J22Rik, 5730419O14Rik

Location

Chromosome 14: 120,836,926-120,905,158 reverse strand.

Reference strain equivalent

Tmtc4

About this transcript

This transcript has 18 exons, is annotated with 41 domains and features and maps to 303 oligo probes.

Gene

This transcript is a product of gene MGP_129S1SvImJ_G0021676.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_129S1SvImJ_T0040424.1	-	3430	741aa	MGP_129S1SvImJ_P0040424	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27352	D6RH66 D6RHA9 Q8BG19	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_129S1SvImJ_T0040426.1	-	2952	741aa	MGP_129S1SvImJ_P0040426	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0040427.1	-	2719	741aa	MGP_129S1SvImJ_P0040427	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_129S1SvImJ_T0040425.1	-	3288	306aa	MGP_129S1SvImJ_P0040425	Nonsense mediated decay		-	-
MGP_129S1SvImJ_T0040431.1	-	842	42aa	MGP_129S1SvImJ_P0040431	Nonsense mediated decay		-	-
MGP_129S1SvImJ_T0040428.1	-	1054	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_129S1SvImJ_T0040432.1	-	466	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_129S1SvImJ_T0040429.1	-	2853	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_129S1SvImJ_T0040430.1	-	2237	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 3,430 bps, Translation length: 741 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BG19

CCDS

This transcript is a member of the Mouse 129S1/SvImJ CCDS set: CCDS27352

Version

MGP_129S1SvImJ_T0040424.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_129S1SvImJ_T0040424.1

Summary

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Transcript: MGP_129S1SvImJ_T0040424.1

Summary

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