Transcript: MGP_129S1SvImJ_T0020160.1

Description

Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 [Source:MGI Symbol;Acc:MGI:1924550]

Gene Synonyms

9430025M21Rik, C730009O10Rik, Lpd, lamellipodin

Location

Chromosome 1: 60,567,479-60,652,822 reverse strand.

Reference strain equivalent

Raph1

About this transcript

This transcript has 14 exons, is annotated with 51 domains and features and maps to 432 oligo probes.

Gene

This transcript is a product of gene MGP_129S1SvImJ_G0016078.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
MGP_129S1SvImJ_T0020160.1	-	10024	1263aa	MGP_129S1SvImJ_P0020160	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F2Z3U3 F2Z3X7 F2Z4B7 G5E867 S4R2K5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_129S1SvImJ_T0020163.1	-	2409	645aa	MGP_129S1SvImJ_P0020163	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_129S1SvImJ_T0020162.1	-	2241	679aa	MGP_129S1SvImJ_P0020162	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_129S1SvImJ_T0020161.1	-	701	215aa	MGP_129S1SvImJ_P0020161	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_129S1SvImJ_T0020167.1	-	690	213aa	MGP_129S1SvImJ_P0020167	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_129S1SvImJ_T0020166.1	-	8452	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
MGP_129S1SvImJ_T0020165.1	-	1663	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
MGP_129S1SvImJ_T0020164.1	-	536	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 10,024 bps, Translation length: 1,263 residues

Version

MGP_129S1SvImJ_T0020160.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_129S1SvImJ_T0020160.1

Summary

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Transcript: MGP_129S1SvImJ_T0020160.1

Summary

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