Transcript: FBtr0346571 santa-maria-RC

Description

scavenger receptor acting in neural tissue and majority of rhodopsin is absent

Gene Synonyms

santa-maria

Location

About this transcript

This transcript has 4 exons, is annotated with 20 domains and features and maps to 60 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0346571	santa-maria-RC	5563	563aa	FBpp0312169	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9QPI3 Q961H6 Q9VM10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0079464	santa-maria-RA	2302	563aa	FBpp0079088	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VM10	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 5,563 bps, Translation length: 563 residues

Version

FBtr0346571

Type

Protein coding

Annotation Method

Feature imported from FlyBase.