stardust
sdt
Primary_assembly X: 8,178,549-8,239,427 forward strand.
This transcript has 16 exons, is annotated with 70 domains and features and maps to 144 oligo probes.
This transcript is a product of gene FBgn0261873 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| FBtr0100376 | sdt-RG | 8462 | 2020aa | FBpp0111740 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E2QD98 Q8WRS2 Q8WRS3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0333720 | sdt-RM | 9152 | 1901aa | FBpp0305869 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PJD0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0308220 | sdt-RL | 7745 | 1941aa | FBpp0300540 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9NEZ2 Q6IIJ2 | - |
| FBtr0340141 | sdt-RO | 7220 | 1606aa | FBpp0309127 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X2JCZ1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0340142 | sdt-RP | 6968 | 1173aa | FBpp0309128 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q6IIJ2 Q6NP81 X2JIZ6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0089978 | sdt-RB | 6828 | 1292aa | FBpp0088916 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D3DMM6 Q8WRS3 Q9W3H6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0089974 | sdt-RE | 6490 | 1367aa | FBpp0088912 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KVT3 Q8WRS2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0308218 | sdt-RJ | 6406 | 1527aa | FBpp0300538 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9NG38 | - |
| FBtr0333721 | sdt-RN | 5650 | 1292aa | FBpp0305870 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9W3H6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0308217 | sdt-RI | 5214 | 1269aa | FBpp0300537 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3LF67 D3DMM6 Q9W3H8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0100375 | sdt-RF | 4482 | 859aa | FBpp0099784 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q6NR03 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0111034 | sdt-RH | 4017 | 934aa | FBpp0110333 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q0KHU9 Q1EBX8 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| FBtr0089975 | sdt-RD | 3838 | 879aa | FBpp0088913 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q6NP43 Q9W3H7 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0308219 | sdt-RK | 3790 | 879aa | FBpp0300539 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9W3H7 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |