Transcript: FBtr0333865 path-RE

Description

pathetic

Gene Synonyms

path

Location

Primary_assembly 3L: 9,494,555-9,497,366 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 35 domains and features and maps to 30 oligo probes.

Gene

This transcript is a product of gene FBgn0036007 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0333864	path-RD	3122	471aa	FBpp0305997	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VT04	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0076427	path-RA	2772	471aa	FBpp0076156	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VT04	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0333865	path-RE	2532	458aa	FBpp0305998	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VT03	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,532 bps, Translation length: 458 residues

Version

FBtr0333865

Type

Protein coding

Annotation Method

Feature imported from FlyBase.

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Transcript: FBtr0333865 path-RE

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Transcript: FBtr0333865 path-RE

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