Transcript: FBtr0332689 CG42570-RB

Gene Synonyms

CG42570

Location

About this transcript

This transcript has 6 exons, is annotated with 28 domains and features and maps to 15 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0301333	CG42570-RA	1977	610aa	FBpp0290548	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D0IQA3 Q6IL55	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0332689	CG42570-RB	1974	609aa	FBpp0304935	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFC9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,974 bps, Translation length: 609 residues

Version

FBtr0332689

Type

Protein coding

Annotation Method

Feature imported from FlyBase.