| FBtr0308596 | bbg-RK | 8707 | 2637aa | FBpp0300820 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5XVG1 Q15K23 Q15K35
Q9VUE8 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| FBtr0273422 | bbg-RC | 8691 | 2637aa | FBpp0271930 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VUE8 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| FBtr0273427 | bbg-RJ | 5997 | 1842aa | FBpp0271935 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q15K24 Q8MT55 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0273425 | bbg-RG | 4221 | 1033aa | FBpp0271933 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q15K25 Q15K26 Q15K28
Q15K29 Q15K30 Q15K32
Q15K34 Q17Q80 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0273428 | bbg-RI | 4159 | 1095aa | FBpp0271936 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q15K31 Q9VUE7 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0273424 | bbg-RF | 4131 | 1033aa | FBpp0271932 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q17Q80 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0273426 | bbg-RH | 3960 | 1033aa | FBpp0271934 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q17Q80 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0273423 | bbg-RE | 3949 | 1101aa | FBpp0271931 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q15K33 Q17Q84 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
