Transcript: FBtr0308249 CG31998-RB

Gene Synonyms

CG31998

Location

About this transcript

This transcript has 5 exons, is annotated with 45 domains and features and maps to 45 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0089145	CG31998-RA	4863	1459aa	FBpp0088212	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C8VV82 Q8MR35 Q9V4B6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
FBtr0308249	CG31998-RB	5980	1363aa	FBpp0300569	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9XVM5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 5,980 bps, Translation length: 1,363 residues

Version

FBtr0308249

Type

Protein coding

Annotation Method

Feature imported from FlyBase.