Transcript: FBtr0306107 Ten-m-RD

Description

Tenascin major

Gene Synonyms

Ten-m

Location

Primary_assembly 3L: 22,293,984-22,407,863 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 66 domains and features and maps to 45 oligo probes.

Gene

This transcript is a product of gene FBgn0004449 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0330159	Ten-m-RE	12169	3349aa	FBpp0303192	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H1UUD9 M9PGF7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
FBtr0306107	Ten-m-RD	12169	3297aa	FBpp0297244	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0078509	Ten-m-RB	11411	2731aa	FBpp0078161	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O61307	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 12,169 bps, Translation length: 3,297 residues

Version

FBtr0306107

Type

Protein coding

Annotation Method

Feature imported from FlyBase.

Transcript: FBtr0306107 Ten-m-RD

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Transcript: FBtr0306107 Ten-m-RD

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