Transcript: FBtr0303293 Nipped-A-RE

Description

Nipped-A

Gene Synonyms

Nipped-A

Location

About this transcript

This transcript has 21 exons, is annotated with 23 domains and features and maps to 33 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0303293	Nipped-A-RE	11515	3790aa	FBpp0292385	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8I8U7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0347556	Nipped-A-RF	11368	3741aa	FBpp0312589	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140SQB4 Q6IM33	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 11,515 bps, Translation length: 3,790 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8I8U7

Version

FBtr0303293

Type

Protein coding

Annotation Method

Feature imported from FlyBase.