Transcript: FBtr0303280 CG42750-RB

Gene Synonyms

CG42750

Location

About this transcript

This transcript has 15 exons, is annotated with 36 domains and features and maps to 96 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0303280	CG42750-RB	6066	1068aa	FBpp0292372	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1WWB2 Q9VJ91 Q9VJ94	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0343817	CG42750-RC	6913	1067aa	FBpp0310369	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JA84	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 15, Coding exons: 11, Transcript length: 6,066 bps, Translation length: 1,068 residues

Version

FBtr0303280

Type

Protein coding

Annotation Method

Feature imported from FlyBase.