Transcript: FBtr0303161 Syx1A-RB

Description

Syntaxin 1A

Gene Synonyms

Syx1A

Location

Primary_assembly 3R: 24,101,600-24,105,763 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 24 domains and features and maps to 43 oligo probes.

Gene

This transcript is a product of gene FBgn0013343 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0303161	Syx1A-RB	2639	296aa	FBpp0292260	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JCZ4 K7Z3L7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0392904	Syx1A-RC	4164	291aa	FBpp0352246	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A126GV04 Q24547	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
FBtr0084588	Syx1A-RA	2385	291aa	FBpp0083973	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A126GV04 Q24547	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,639 bps, Translation length: 296 residues

Version

FBtr0303161

Type

Protein coding

Annotation Method

Feature imported from FlyBase.

Transcript: FBtr0303161 Syx1A-RB

Summary

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Transcript: FBtr0303161 Syx1A-RB

Summary

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