Transcript: FBtr0301717 CG42588-RA

Gene Synonyms

CG42588

Location

About this transcript

This transcript has 10 exons, is annotated with 63 domains and features and maps to 75 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0301717	CG42588-RA	8603	2730aa	FBpp0290931	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9QP03 Q29QV8 Q8MRV4 Q9VU16	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0304053	CG42588-RB	8528	2705aa	FBpp0293016	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C1C596 M9MSL0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 8,603 bps, Translation length: 2,730 residues

Version

FBtr0301717

Type

Protein coding

Annotation Method

Feature imported from FlyBase.