Transcript: FBtr0089717 pnt-RB

Description

pointed

Gene Synonyms

pnt

Location

Primary_assembly 3R: 23,290,231-23,346,167 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 38 domains and features and maps to 30 oligo probes.

Gene

This transcript is a product of gene FBgn0003118 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0089717	pnt-RB	4074	718aa	FBpp0088658	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P51023	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0334554	pnt-RE	3715	625aa	FBpp0306621	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KH96 N0D853	-
FBtr0089715	pnt-RC	2996	623aa	FBpp0088656	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P51022	-
FBtr0089716	pnt-RD	2805	636aa	FBpp0088657	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H8F4R1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 4,074 bps, Translation length: 718 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51023

Version

FBtr0089717

Type

Protein coding

Annotation Method

Feature imported from FlyBase.

Transcript: FBtr0089717 pnt-RB

Summary

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Transcript: FBtr0089717 pnt-RB

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