Transcript: FBtr0085964 Clamp-RA

Description

Chromatin-linked adaptor for MSL proteins

Gene Synonyms

Clamp

Location

About this transcript

This transcript has 7 exons, is annotated with 49 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0100407	Clamp-RB	2897	566aa	FBpp0099821	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IGP5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0085964	Clamp-RA	2636	561aa	FBpp0085317	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V9N4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,636 bps, Translation length: 561 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9V9N4

Version

FBtr0085964

Type

Protein coding

Annotation Method

Feature imported from FlyBase.