Transcript: FBtr0084259 tHMG2-RA

Description

testis-enriched HMG-box-containing protein 2

Gene Synonyms

tHMG2

Location

About this transcript

This transcript has 1 exon, is annotated with 8 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0301483	tHMG2-RB	550	134aa	FBpp0290698	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIT5 G2J5V9 Q8T957	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0084259	tHMG2-RA	588	133aa	FBpp0083652	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VCZ4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 588 bps, Translation length: 133 residues

Version

FBtr0084259

Type

Protein coding

Annotation Method

Feature imported from FlyBase.