Transcript: FBtr0082531 prd1-RA

Description

pruning defect 1

Gene Synonyms

prd1

Location

About this transcript

This transcript has 10 exons, is annotated with 26 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0082531	prd1-RA	5206	1354aa	FBpp0082005	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NR50 Q9VGI1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0333819	prd1-RB	4894	1330aa	FBpp0305953	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KH60	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 5,206 bps, Translation length: 1,354 residues

Version

FBtr0082531

Type

Protein coding

Annotation Method

Feature imported from FlyBase.