Transcript: FBtr0080165 aub-RA

Description

aubergine

Gene Synonyms

aub

Location

About this transcript

This transcript has 9 exons, is annotated with 18 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0080165	aub-RA	2825	866aa	FBpp0079754	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O76922	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0112793	aub-RC	2808	795aa	FBpp0111705	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95PE5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,825 bps, Translation length: 866 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O76922

Version

FBtr0080165

Type

Protein coding

Annotation Method

Feature imported from FlyBase.