Transcript: FBtr0078764 NKCC-RB

Description

sodium potassium chloride cotransporter

Gene Synonyms

NKCC

Location

About this transcript

This transcript has 10 exons, is annotated with 47 domains and features and maps to 45 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0078764	NKCC-RB	3891	1068aa	FBpp0078411	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VNC7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0078765	NKCC-RA	3297	995aa	FBpp0078412	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SWS0 Q9VNC6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,891 bps, Translation length: 1,068 residues

Version

FBtr0078764

Type

Protein coding

Annotation Method

Feature imported from FlyBase.