Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
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External References
- General identifiers
- Oligo probes
Supporting evidence
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Transcript: FBtr0076878 CTCF-RA

Description

CTCF

Gene Synonyms

CTCF

Location

About this transcript

This transcript has 4 exons, is annotated with 68 domains and features and maps to 45 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0076878	CTCF-RA	2892	818aa	FBpp0076588	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8TA44 Q9VS55	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,892 bps, Translation length: 818 residues

Version

FBtr0076878

Type

Protein coding

Annotation Method

Feature imported from FlyBase.