Transcript: FBtr0075908 ara-RA

Description

araucan

Gene Synonyms

ara

Location

About this transcript

This transcript has 5 exons, is annotated with 37 domains and features and maps to 34 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0075908	ara-RA	2942	717aa	FBpp0075640	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q24248 Q86NL5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0300551	ara-RB	2918	709aa	FBpp0289778	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHZ0 Q5U114	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,942 bps, Translation length: 717 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q24248

Version

FBtr0075908

Type

Protein coding

Annotation Method

Feature imported from FlyBase.