Transcript: FBtr0075283 rogdi-RA

Description

rogdi

Gene Synonyms

rogdi

Location

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features and maps to 29 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0075282	rogdi-RB	2335	343aa	FBpp0075042	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
FBtr0075283	rogdi-RA	2028	268aa	FBpp0075043	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VVE2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,028 bps, Translation length: 268 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9VVE2

Version

FBtr0075283

Type

Protein coding

Annotation Method

Feature imported from FlyBase.