Transcript: FBtr0075159 CG5535-RB

Gene Synonyms

CG5535

Location

About this transcript

This transcript has 5 exons, is annotated with 52 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0273277	CG5535-RC	2040	630aa	FBpp0271785	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5RJ28 Q8MT96 Q9VVM0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0075159	CG5535-RB	2147	621aa	FBpp0074925	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KUR6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,147 bps, Translation length: 621 residues

Version

FBtr0075159

Type

Protein coding

Annotation Method

Feature imported from FlyBase.