Transcript: FBtr0070561 CG4116-RA

Gene Synonyms

CG4116

Location

About this transcript

This transcript has 1 exon, is annotated with 15 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0070561	CG4116-RA	948	264aa	FBpp0070536	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7VJR8 Q9W4U0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0332494	CG4116-RB	868	233aa	FBpp0304770	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PIW5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 948 bps, Translation length: 264 residues

Version

FBtr0070561

Type

Protein coding

Annotation Method

Feature imported from FlyBase.