Transcript: FBtr0070366 Pgam5-RA

Description

Phosphoglycerate mutase 5

Gene Synonyms

Pgam5

Location

About this transcript

This transcript has 2 exons, is annotated with 14 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0070366	Pgam5-RA	1100	289aa	FBpp0070350	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O46084	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0339601	Pgam5-RB	1097	288aa	FBpp0308673	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JC94	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,100 bps, Translation length: 289 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O46084

Version

FBtr0070366

Type

Protein coding

Annotation Method

Feature imported from FlyBase.