Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: FBtr0345599 SmydA-8-RD

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Description

SET and MYND domain containing, arthropod-specific, member 8

Gene Synonyms

SmydA-8

Location

Primary_assembly X: 2,205,515-2,208,678 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 12 domains and features and maps to 30 oligo probes.

Gene

This transcript is a product of gene FBgn0053548 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0345599	SmydA-8-RD	2094	462aa	FBpp0311668	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O46040 X2JDK3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0070422	SmydA-8-RA	1749	462aa	FBpp0070406	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5RJI3 O46040 X2JDK3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0070421	SmydA-8-RB	1547	448aa	FBpp0070405	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P83501	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0342772	SmydA-8-RC	681	158aa	FBpp0309624	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JI38	-

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Protein summary

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Protein domains for FBpp0311668.

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