Secretory 16
Sec16
Primary_assembly X: 12,596,047-12,607,707 forward strand.
This transcript has 9 exons, is annotated with 75 domains and features and maps to 13 oligo probes.
This transcript is a product of gene FBgn0052654 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| FBtr0340105 | Sec16-RI | 7635 | 2326aa | FBpp0309104 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A9YGW7 A9YGX4 F6J236 X2JEM2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| FBtr0340106 | Sec16-RJ | 8008 | 2242aa | FBpp0309105 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8SXX7 X2JEY9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0310304 | Sec16-RF | 7900 | 2250aa | FBpp0301987 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PHF1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0340104 | Sec16-RH | 7693 | 2137aa | FBpp0309103 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X2JJP5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0113444 | Sec16-RD | 7320 | 2221aa | FBpp0112356 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8JUU3 A9YGX8 A9YGY7 F6J248 F6J249 F6J250 Q5BI67 Q8T0U9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0113445 | Sec16-RE | 7226 | 2021aa | FBpp0112357 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8JUU1 Q5BI67 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |