Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: FBtr0332381 pcx-RC

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Description

pecanex

Gene Synonyms

pcx

Location

Primary_assembly X: 2,225,296-2,238,045 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 131 domains and features and maps to 36 oligo probes.

Gene

This transcript is a product of gene FBgn0003048 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0342766	pcx-RE	12119	3417aa	FBpp0309618	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PGU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0332381	pcx-RC	12107	3413aa	FBpp0304655	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PGB7 P18490	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0344153	pcx-RF	12023	3413aa	FBpp0310566	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PGB7 P18490	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Protein summary

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Protein domains for FBpp0304655.

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