Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

.

Transcript: FBtr0331159 RunxA-RC

.

Description

Runt related A

Gene Synonyms

RunxA

Location

Primary_assembly X: 20,590,252-20,623,773 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 27 domains and features and maps to 59 oligo probes.

Gene

This transcript is a product of gene FBgn0083981 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0331160	RunxA-RD	4831	663aa	FBpp0303587	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PI08	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
FBtr0331159	RunxA-RC	4831	651aa	FBpp0303586	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R9PY33	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0308028	RunxA-RB	4816	646aa	FBpp0300389	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KHQ3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Protein summary

.

Protein domains for FBpp0303586.

.