couch potato
cpo
Primary_assembly 3R: 17,944,106-18,015,779 forward strand.
This transcript has 12 exons, is annotated with 27 domains and features and maps to 74 oligo probes.
This transcript is a product of gene FBgn0263995 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| FBtr0330274 | cpo-RS | 9229 | 962aa | FBpp0303306 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D2NUI7 M1KNR7 M1KNS7 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| FBtr0330275 | cpo-RT | 9743 | 607aa | FBpp0303307 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0330270 | cpo-RO | 9118 | 748aa | FBpp0303302 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KGV8 M1KP51 | - |
| FBtr0330277 | cpo-RV | 8397 | 607aa | FBpp0303309 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M1L9Z9 M1LED9 M1LGU0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0330273 | cpo-RR | 7247 | 749aa | FBpp0303305 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M1KNG5 M1KNL9 | - |
| FBtr0330280 | cpo-RY | 6131 | 606aa | FBpp0303312 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KGD8 Q01617 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| FBtr0330279 | cpo-RX | 6116 | 606aa | FBpp0303311 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KGD8 Q01617 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| FBtr0330269 | cpo-RN | 5675 | 606aa | FBpp0303301 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KGD8 Q01617 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| FBtr0330271 | cpo-RP | 5461 | 841aa | FBpp0303303 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KHP4 | - |
| FBtr0330276 | cpo-RU | 5086 | 606aa | FBpp0303308 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KGD8 Q01617 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| FBtr0330272 | cpo-RQ | 4524 | 762aa | FBpp0303304 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KHB6 M1KNR7 M1KNS7 M1KP51 M1KP83 | - |
| FBtr0330278 | cpo-RW | 4469 | 606aa | FBpp0303310 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KGD8 M1KP99 M1L961 M1L9L4 M1L9Z9 M1LDX6 M1LE62 Q01617 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |